=========== Quick Start =========== Luna docker images are available to help you get started with Luna. Before running these images, be sure to install `Docker `_ on your workspace. Running Luna Pathology Tutorials on Docker ========================================== We provide a docker image to help you get started with pathology analysis using Luna workflows. This image includes: - Luna pathology library - Luna notebook tutorials with sample data Along with web applications: - JupyterLab for running notebooks - Digital Slide Archive (girder and mongodb) for viewing the slides and annotations These set of notebook tutorials walk you through analysis workflows. A static version of the notebook :ref:`Tutorials` is also available on the documentation site for your reference. 1. Clone the git repository --------------------------- .. code-block:: git clone https://github.com/msk-mind/docker.git 2. Run the docker-compose ------------------------- - Build the docker image .. code-block:: cd docker/luna_tutorial make build - Run the docker image .. code-block:: make run Copy paste the Jupyter URL printed in `luna_tutorial/vmount/logs/tutorial.log`, and you will see a set of ipynb notebooks for exploring end-to-end Luna pathology analysis workflow. To login to DSA, go to http://localhost:8080 and login with admin/password. After login, you can navigate to the TCGA Collection, and explore images on HistomicsUI. For details on using DSA, please refer to `DSA documentation `_